Hemchandra Deka

2 Questions 3 Answers 0 Followers

Questions related from Hemchandra Deka

How do I get the topology data (and parameter) for alpha-ketoglutarate (AKG) and any other modified nitrogenous base?

Hello! I have just started NAMD to run some simulation. Going through the tutorials i find that for generation of a PSF file I need to call a specific topology file. I have found various such...

21 June 2016 9,962 3 View

What are the steps to run MD simulation using acetonitrile as implicit solvent?

I am novice to the MD simulation. For MD simulation I have been following the NAMD tutorials. In the midway I got a bit confused how should I proceed; if I have to run my simulation using...

01 January 1970 4,562 3 View