Hazem Reda

4 Questions 2 Answers 0 Followers

Questions related from Hazem Reda

How to add charge to metal ion ZN in a pdb file that will undergo flexible docking via autodock tool to prepare the pdbqt files and Vina docking?

the protein i am working on is HPV16 E6 ID : 4xr8 chain H . It contains 2 zinc atoms that are important as they form zinc finger. i Manually edited pdb file in column 79,80 and add 2+ to both Zn...

15 July 2021 8,875 3 View

Can i find free Vaxi-jen 2.0 tool or any similar tool for determining the antigenicity of the protein sequence ?

i am working on research aiming at expecting CD8 CTL epitopes for designing peptide based vaccines for high risk human papilloma virus Hr HPV ?

02 January 2019 5,794 1 View

Where is the best source for proteins primary structures and corresponding secondary structure ?

I am trying to find away to predict 2ry structure of protein" helices or sheets" from the amino acid sequence by studying the amino acids doublets and triplets so I can predict the helix if a...

22 December 2017 4,286 4 View

Is there any way to predict 3d structure of protein theoretically just by knowing the sequence?

i am looking forward to do research on general law for all proteins structure

06 November 2016 5,990 4 View