Hasan Alanya

3 Questions 9 Answers 0 Followers

Questions related from Hasan Alanya

Calculating the frequency of every pathogenic germline variant in every disease cohort?

I am trying to calculate the frequency of every pathogenic germline variant in every disease cohort. For ex: for variant 1:17588689, there are 20 het.variants (column H), I need to report what...

13 June 2022 6,940 0 View

Removing the missing values (NAs) from dataframe in R (NAs introduced by coercion)?

Happy Sunday everyone, I am trying to calculate row - wise mean and variance in R and then I will sort them. I used to "Absent/Present" calls from the Affymetrix algorithm to flag genes with...

13 May 2018 3,086 12 View

How to obtain a Chip Description File (CDF)?

Hello everyone, I have to analyse data from Affymetrix microarray (Human Genome U133 Plus 2.0 Array) with Bioconductor and it is the first time I am using Bioconductor. I got .cel files from...

12 March 2018 5,299 3 View