Garima Ayachit

4 Questions 29 Answers 0 Followers

Questions related from Garima Ayachit

How to filter reads in fastq for small RNA?

Hi I am analyzing a small RNA dataset. I read in a paper that reads occurring less than 5 times were filtered. I was wondering how to it exactly. If anyone can help Thanks in advance

08 August 2018 1,430 2 View

What should be the parameters for mapping small RNA data to precursor sequences or Rfam database using bowtie?

Hello I am trying to screen small RNAs from sequencing data. The genome of the species is available but not well annotated and no microRNAs have been identified yet. I am trying to find...

06 June 2018 5,337 2 View

Any suggestions for good free online courses for machine learning?

Hello everyone I am trying to develop a machine learning tool for microRNAs. But I am new to the concept. I have some experience with python and Perl coding. Can anyone suggest some free online...

11 November 2017 9,791 4 View

Water molecule starting at atom 69515 can not be settled. Does anyone have an idea of this in GROMACS ?

Hi I am fairly new to GROMACS and simulating a protein. I am getting the following error gmx mdrun -deffnm nvt Source code file:...

07 July 2016 7,491 23 View