Fotis Baltoumas

2 Questions 24 Answers 0 Followers

Questions related from Fotis Baltoumas

Is there a way to perform a multiple sequence alignment in HMMER (hmmalign) using multiple profiles?

I have been trying to align a set of amino acid sequences using HMM profiles and the HMMER package. In my set, each sequence consists of two domains, for which two distinct HMM profiles are...

22 April 2015 4,888 2 View

Is there a method to estimate hydrogen bond energy in protein-protein interactions?

I am currently trying to calculate intermolecular energies in crystal structures of protein-protein complexes. What are the available options (some software, or at least a method/equation I could...

06 November 2013 2,232 10 View