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Questions related from Erma Fatiha Muhammad
Hi everyone. I want to use hbonanza to analyses hydrogen bonds formation during MD simulation time for my protein-ligand complex system. Previously, I run md using GROMACS 4.6.5, further, I try to...
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1. I have used many ways in order to prove the stability of my conformation system. One of the way is to use equilibration using canonical ensembles (NVT) followed by isothermal isobaric ensembles...
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I am doing the molecular docking and molecular dynamics simulation of protein-ligand interactions. In the first part, I was doing blind docking to find the possible binding sites between protein...
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