Ellen Lark

4 Questions 12 Answers 0 Followers

Questions related from Ellen Lark

Does someone have precise instructions on making blood agar (fish)?

I will be making blood agar using fish blood. Can anyone give me the following information? There is a paper, but these questions are not answered and I have not been able to contact the authors...

04 April 2018 8,576 2 View

How do I merge rep_set.fna files in QIIME? Is it okay to simply concatenate them?

I need to merge several QIIME runs done from Illumina sequencing. There are instructions on how to merge the biom files and mapping files (I've already done the mapping file) but nothing exists...

12 December 2015 451 6 View

Can anyone help with pulling specific sequences that correspond to OTU IDs from Qiime?

I used to use Qiime for 454 sequences and when one was through, one could look for sequence OTU identifiers in one of the sequence file headers if one wanted to pull specific sequences for further...

04 April 2015 2,295 1 View

How do we trim primers from FASTQ files for QIIME?

We need to trim both a barcode primer as well as some universal primers from FASTQ files so that we can run the files through QIIME. The QIIME tutorial states how to deal with the barcodes, but...

05 May 2014 8,390 3 View