David Charles Simpson

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Questions related from David Charles Simpson

Is it possible to convert Waters Synapt G2-Si raw data to the mzML format?

I have received raw data from the Waters demo lab that was recorded on their Synapt G2-Si instrument. The experiment was bottom-up proteomics with data-dependent acquisition, but the twist is that...

26 February 2015 9,780 5 View

Has anyone managed to make a successful ProteomeXchange submission of shotgun proteomics results searched using X! Tandem/Trans-Proteomic Pipeline?

I like the idea of ProteomeXchange, which is a public archive for sharing mass spectrometry-based proteomics data. However, the current tool for preparing a submission of Trans-Proteomic...

09 September 2014 2,052 2 View

Optimization for iTRAQ-8 versus iTRAQ-4?

The Mechtler group reported in 2010 that 4-plex iTRAQ performed better than 6-plex TMT, which in turn performed better than 8-plex iTRAQ (see linked publication; performance chiefly measured by...

06 August 2014 4,156 7 View