Chong Qi

3 Questions 5 Answers 0 Followers

Questions related from Chong Qi

Different docking results were obtained when the grid box center changes a little bit, but both covering the whole receptor. Why?

I was doing blink docking using AutoDock Vina. All the parameters are same, ligand and receptor also the same, just that the grid box center is a little bit different (I did at different time...

16 December 2024 9,705 2 View

Trying to dock insulin-receptor but was failed, stated to try again with smaller molecule. Is it because the target(ins) too big? How should I do?

Hi guys, I am trying to design an aptamer for insulin via in silico methods. I used aptcad webserver for docking but kept showing failed, stated to try again with smaller molecule. Is it because...

06 November 2024 2,546 3 View

How to select proper PDB structure? Prior to molecular docking, how to identify and fix errors with the pdb structure?

I am having problem in the selection of monomeric human insulin pdb structure for the development of aptamer via molecular docking and molecular dynamics. How should I select the best suit one...

01 January 1970 8,817 5 View