Can Kucuk

5 Questions 8 Answers 0 Followers

Questions related from Can Kucuk

Do you recommend Ion PGM or Ion Proton for mutation or expression analysis?

I'd like to hear your opinions about mutation or mRNA expression analyses based on your recent experiences with Ion Torrent platforms. Which bioinformatics tools are available for data...

02 February 2015 4,579 1 View

Is it possible to perform whole exome sequencing with 500X average coverage?

I'd like to know whether it is technically possible to improve rare mutant detection frequency by increasing the depth of the sequencing to 500X for WES using illumina library preparation kits and...

02 February 2015 5,376 6 View

What are the critical factors to be considered when establishing a new proteomic-metabolic core lab?

How much lab space is needed on average? What type of lab equipment/room organization is needed to minimize any contamination issues? Which instruments are the most user friendly and mechanically...

11 November 2014 6,992 1 View

Is there any public depository to upload the global methylation results of human patient samples during manuscript submission?

Public database to deposit methylation data.

10 October 2013 3,381 2 View

How can I determine the expression of EBV-coded genes by RNA-Seq?

I am using RNA-Seq to determine the gene expression in human tumor samples. Is there any way to determine the expression of the Epstein Barr Virus (EBV) coded genes by looking at the Illumina...

09 September 2013 9,549 0 View