Azamat Armanuly

4 Questions 5 Answers 0 Followers

Questions related from Azamat Armanuly

For structural clash visualization between protein-protein complex, which tool should be used? Any good suggestions?

The goal is to visualize protein-protein structural clash

04 April 2023 2,224 0 View

Is there any effective way to select generated antibody candidates (from a neural network), which were docked to antigen, using Rosetta Dock server?

Rosetta dock web server (https://r2.graylab.jhu.edu/auth/login?next=%2Fapps%2Fview%2Fdocking%2F8362) was used to select proper antibody candidates, and the thing is which exact quantitative...

21 March 2023 5,277 0 View

How to merge a protein sequence with its generated structure in PyMOL or any other software tool?

A protein structure was generated first using a deep-learning method, which only returns the visualized 3D structure, but not the sequence. Later, the sequence was generated by using another...

09 March 2023 9,156 10 View

Protein-protein docking

Is there any effective way to select generated antibody candidates (from a neural network), which were docked to antigen, using Rosetta Dock server? Rosetta dock web server...

01 January 1970 2,308 0 View