Ashish Agrahari

2 Questions 8 Answers 0 Followers

Questions related from Ashish Agrahari

Why RMSD plot of protein backbone is deviating so much ?

I am doing membrane protein simulation. I plotted the RMSD graph to check the convergence of my protein. I found unusual deviation in RMSD of bacbone of my protein. below I have attached the RMSD...

15 November 2016 7,397 10 View

Is it significant to do the molecular dynamics simulation of transmebrane protein without modelling it in to membrane???

I have perform docking simulation by utilizing autodock tool. my protein is a trans-membrane protein .... can I do the simulation of complex without modelling my protein in membrane Thank You.

05 May 2016 573 3 View