Arijit Sarkar

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Questions related from Arijit Sarkar

Folding simulation output shows rotation and unfolding, how to proceed ?

GROMACS version:2022.4 Hi, I am trying to do 10ns folding simulation for receptor terminals (N and C both). In the output, I observe the structure gets folded initially, but gradually after...

06 October 2023 4,003 0 View

Gmx select - how to select specific residues within a distance from another?

GROMACS version: 2022.4 Hi, I am working with a GPCR system embedded in lipid bilayer and water. I want to select every water (group 31 in index file) that is situated below 4A from a particular...

04 September 2023 8,597 0 View