Archit Garg

3 Questions 91 Answers 0 Followers

Questions related from Archit Garg

How to run multiple simulations in Gromacs 4.0.7 package on 4 cores workstation?

How to run parallel mdrun for two different proteins on the same computer in Gromacs 4.0.7? Is it possible to run two simulations on the same computer having 4 cores processor?

09 September 2013 1,647 3 View

How to extend the protein simulation in Gromacs from 1000 ps to 10000 ps?

I have run the simulation using Gromacs forcefield for 1000 ps. Now I want to extend it to 10000 ps. How should I proceed? According to gromacs documentation, it can be done by changing the time...

09 September 2013 6,441 6 View

Can someone help with a problem while running the modeller?

I am trying to make the model for one of the protein by using a template. The template pdb file starts from 47th residue while in the sequence given in the fasta format for that pdb file, the...

07 July 2013 5,047 3 View