Anurag Chaturvedi

3 Questions 22 Answers 0 Followers

Questions related from Anurag Chaturvedi

How can I generate a smoothing plot for Fst along the genome from Lositan output ?

Hi All, I want to make a genome wide Fst plot using the Lositan output along with P-Values calculated by lositan. Any inputs will be appreciated. Thanks, Anurag

12 December 2014 8,322 6 View

Can anyone help to calculate the statistically significant outlier for Pairwise Fst from VCFTools?

Hi, I calculated pairwise Fst using VCFTools: vcftools --vcf input_data.vcf --weir-fst-pop population_1.txt --weir-fst-pop population_2.txt --out pop1_vs_pop2 What method I should use for...

10 October 2014 4,873 6 View

How to rank primer set obtained from NGS data for further validation?

I have around 500 primers set obtained after miSeq run and want to validate best 20 on the basis of primer properties. May someone can suggest what will be the best procedure to rank these 500 to...

08 August 2014 3,326 3 View