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Is it difficult to stabilize an intrinsically disordered protein by MD Simulation? What is the solution for this?
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I have simulated my viral protein at a temperature of 300K (room temperature). However, it does not seem to stabilize even after 400 ns of simulation. I have observed many papers where simulation...
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What is normal mode analysis? If a protein undergoes a single amino acid mutation what information will normal mode analysis of the wild and mutant variant of that protein give us?
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If hits with high affinities between -9 and -10 kcal/mol are identified by virtual screening against a protein with no druggable cavities (As identified by reliable druggability predictors like...
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