Ankush Bansal

7 Questions 18 Answers 0 Followers

Questions related from Ankush Bansal

ComBat for batch effect ?

Have you used ComBat for adjusting batch effects using an empirical Bayes framework ? If yes, I have few doubts: 1) Why we should use this ? 2) If we want to process data for DEG analysis using...

14 February 2019 7,533 0 View

What are structural properties of biological networks while dealing in terms of complex sytems or non linear dynamics ?

There are various structural measures like degree distribution, clustering coefficient, and many more. Apart from these basic topological, is there any other method or tool available which can...

30 July 2018 3,794 2 View

I have Sensitivity or True Positive Rate (TPR) and Specificity or True Negative Rate (TNR). Can I calculate accuracy using these two parameters ?

I have used Weka to classify my dataset using libSVM. I have received Sensitivity and Specificity values for my dataset. Is it possible to calculate accuracy using these two parameters.

24 July 2018 4,765 4 View

Is there any online server available to compare my gene or protein targets with FDA lbrary ?

I have few selected protein targets through interdisciplinary approaches, I want to compare these targets with FDA approved drugs for docking purpose. Is there any online web server available to...

24 July 2018 3,945 0 View

mathematical Modeling for electroporation?

I am interested to make a mathematical model for reversible electroporation. Thanks.

01 January 1970 6,815 2 View

Best bioinformatics tool for Splicing in RNA seq ?

Please suggest tool for splice variant identification from RNAseq data.? MAJIQ is one option. Any other suggestions?

01 January 1970 7,637 6 View

Looking for Collaboration - Genome Wide analysis to correlate omics data for personalised therapies

We are working on computational aspect of target screening for effective diagnostic. We are combining systems pharmacogenomics, chemoinformatics, systems biology, graph theory, structural biology...

01 January 1970 4,832 2 View