Anabia Sohail

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Questions related from Anabia Sohail

How can probability cut off value be set for amino acids residues that causes functional divergence by using False Discover Rate (Diverge Software)?

I have used Diverge 3 for type1 analysis. Kindly guide me how can I define probability cut off value for amino acids residues that are causing functional divergence (site profile of type...

08 August 2015 992 0 View

How can I set a threshold for amino acid site profile of type1 functional divergence?

How can I set threshold for amino acid site profile of type1 functional divergence implemented in DIVERGE 3.0 version? I am analysing type 1 functional divergence of gene family consisting of four...

06 June 2015 9,294 0 View

How can I calculate p value for rate analysis of particular lineage ?

How can I calculate p value for rate analysis of particular lineage? I have used Mega 6 for estimation of dN/dS ratio ? Kindly guide me. I have used 5 primates (human. Chimp, gorilla etc)...

06 June 2015 5,276 4 View

Which criteria should be used for the evaluation of a Protein structure ?

I have constructed protein structure using I-Tasser serve. What evaluation criteria should be used for selection or rejection of the I-Tasser generated model? I-Tasser results for my protein are...

03 March 2015 9,823 4 View