21 Questions 189 Answers 0 Followers
Questions related from Alexey Nikitin
I'm interested in the possibility of reproducing thermodynamic properties within 5%.
08 August 2018 9,413 3 View
What do you think about SwissParam, MolMeccano, GAAMP?
09 September 2017 5,089 5 View
What is better for a beginner?
08 August 2015 7,033 3 View
Sometimes people justify the imposition of restrictions on the length of the bonds the fact that in such way simulates a quantum mechanical effect of "freezing" of high-frequency oscillations.
06 June 2015 3,761 2 View
Is there a model that can be regarded as the standard for comparison? Are the coordinates?
12 December 2014 476 2 View
Thanks.
12 December 2014 9,566 8 View
Why Urey-Bradley term largely abandoned in modern force fields?
11 November 2014 4,026 9 View
Such interactions are explicitly considered in the force fields of the 70s.
09 September 2014 9,270 7 View
What quantum-chemical method is preferable to determine the dispersion interaction between the low-polar molecules?
09 September 2014 8,699 18 View
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08 August 2014 1,539 3 View
I'm interested in polar compounds in which there is a significant contribution of covalence, for example alkaline earth metal halides.
03 March 2014 8,326 14 View
Molecular Mechanics.
03 March 2014 7,417 2 View
I would like to write a convenient overlay procedure. What features should it have to be really comfortable for everyone?
03 March 2014 1,354 1 View
I deal with VALBOND. Is there anything comparable in quality?
01 January 2014 5,264 1 View
In some force fields, the hydrogen bond is described not only by the electrostatic term, but the angle one. Does this have any justification other than the crystallographic statistics?
11 November 2013 631 3 View
Are there some problems associated with AMBER03?
10 October 2013 2,114 3 View
Are there any _formal_ rules which can determine the hybridization of an atom? For example, for PtH2 I can write different versions of platinum hybridization: sd1, sd5. How to determine the right...
09 September 2013 5,365 4 View
I would like to take the PDB file and get a description of its tertiary structure.
09 September 2013 7,475 2 View
08 August 2013 7,629 4 View
Which graphical MD program is the most convenient to build models?
08 August 2013 255 22 View
In what solutions can we talk about it and why? Iodine in benzene, hydrogen bond in water, salt in water.
01 January 1970 5,125 3 View