Aditi Joshi

4 Questions 3 Answers 0 Followers

Questions related from Aditi Joshi

Can someone provide help regarding the force field in Discovery Studio?

I have modelled a protein with NADH as cofactor.When I try to perform energy minimisation it asks for a force field. But it always gives an error saying that protein has non-protein or non-amino...

15 April 2015 6,732 0 View

Why am I getting very high positive energy of binding in Autodock?

I have been using autodock for quite a long time but have not faced the problem of getting very high and positive energy of binding with my docking results. Ligand used was cyclopentanone and...

29 October 2014 5,982 3 View

Query related to Modeller 9.13- Can anyone help?

I don't have any idea about Python programming and i have recently started using Modeller. I have used the scripts that are present on the modeller site. I am able to successfully run the first...

14 April 2014 3,801 4 View

Error while running the autogrid4 for docking - any thoughts?

I have a protein with PDB (1ZK4), it obtains NADP as ligand in its structure when I tried to dock it, I faced error while creating the PDBQT file for this protein in AutoDock :Error: "Non-integral...

12 March 2014 8,022 2 View