Hello,
I have ran MD simulation using NAMD and CHARMM36 forcefield and want to calculate RMSD values of multiple residues.(EX: RESID1 to52,133-193,281 to 296)How can I calculate this using VMD?
I appreciate your valuable suggestions.
Thank you.
measure rmsd selection
http://www-s.ks.uiuc.edu/Research/vmd/vmd-1.9.1/ug/node136.html
Thank you Martin Klvana for your answer!
You can also use OVITO to calculate that
Thank you Khayrul Islam for your valuable answer!
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