Hello Everyone,
I am using GROMACS for doing various simulations, now I started working on REMD (Replica exchange molecular Dynamics) for understanding folding pattern of few of my proteins. If anyone could briefly explain me how to choose a temperature intervals for simulations, it would be so helpful. Also I couldn't exactly get how to use this equation Ti = T0*e k*i to derive temperature intervals. Total atoms in my protein is 757. Please let me know your comments.
Thanks!